ForensicRNA
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Index
hsa_chr5_0114000
Basic Information
Symbol
hsa_chr5_0114000
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0145
Host gene
RAPGEF6
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:130924372-130927645
UCSC (hg19)
Location (GRCh38)
5:131588679-131591952
UCSC (hg38)
External Database
circbank
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-95.55
kcal/mol
Thermodynamic ensemble
Free Energy:
-97.38
kcal/mol
Frequency:
0.0512
Diversity:
11.02
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
COPY
((((..((((((.(((((((.((((..((((((((((((.((((((((((((((((((((((((..............................((((((..................................................................))))))))))))))))))))))).))))))).))))))))))))..)))).))))))).))))))..))))((.........))
Thermodynamic Ensemble Prediction
COPY
((((..((((((.(((((((.((((..((((((((((((.((((((((((((((((((((((((.,,,..................................................................................................,.})},)))))))))))))))))}})))))).))))))))))))..)))).))))))).))))))..))))((.........))
Forensic Context
No forensic context available.