Basic Information
Symbol
hsa_RAPGEF6_0024100
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0140
Host gene
RAPGEF6
Type of circRNA
Intron-Intron
Location (GRCh37)
5:130945811-130958657
UCSC (hg19)
Location (GRCh38)
5:131610118-131622964
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-42.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-47.05 kcal/mol
Frequency:
0.0006
Diversity:
48.27
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((............((((...(((....)))...))))...(((((((((((................(((....)))..........(((((((((((...((.............................))...))))..)))))))((((((((..(((....(((.....)))...)))..))))))))(((((................))))).)))))))))))))((.((((((..........))))))))
Thermodynamic Ensemble Prediction
((............((((...(((....)))...))))...{((((((((((.{(.............,{{....,}|.........,{((((((((((...((.............................)).,.))))..))))))),|||{{{{..|||.},,({({{{{..,,.}}))).,)),,,,}|{,((({{{.....}}.)}}}.},.)).)))))))))))))((.((((((..........))))))))
Forensic Context
No forensic context available.