Basic Information
Symbol
hsa_SATB2_0004000
RNA Class
transcript (circRNA)
Alias
hsa_circ_0118561
hsa_circSATB2_047
hsa-SATB2_0008
Host gene
SATB2
Type of circRNA
Exon-Exon
Location (GRCh37)
2:200188526-200193633
UCSC (hg19)
Location (GRCh38)
2:199323803-199328910
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-98.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-104.84 kcal/mol
Frequency:
0.0001
Diversity:
98.90
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((((.((((((((((((.(((........)))......(((.(((((...............)))))))).))))))))))))((((.((((......((((((((....))).))))))))).)))).(((..(((.((((........))))((((..((.((.((.((...)))).)).))..))))...)))..))).(((((......))).))....))))))))...)))((.....((((.....))))...............((.(((((((.((.((((.(((....))).......(((((..((....))...))))).)))).))))))))).))...........))
Thermodynamic Ensemble Prediction
(((((((((((.((((((((((((.,((........})},,,...{{{.(({((...,.....,.....)))))))).}))))))))))){(({.((((......((((((((....))).)))))}})).))}|.(((,.((({(({(........}}}}((((.,((.({.{{.({...)))).)).}),,)))),},))}..})),||{((......))}.},....))))))))...)))((....{(((((.((((..................)))))))))}.,{.,.{..(((....)))..,....(((((..,{,...}}...))))),|,,((({...)))).}}........}}.))
Forensic Context
No forensic context available.