Basic Information

Symbol
hsa_SATB2_0011400
RNA Class
transcript (circRNA)
Alias
hsa_circ_0118576 hsa_circSATB2_025 hsa-SATB2_0042
Host gene
SATB2
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
2:200245087-200279705 UCSC (hg19)
Location (GRCh38)
2:199380364-199414982 UCSC (hg38)
External Database
circbank circBase

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-41.40 kcal/mol
Thermodynamic ensemble
Free Energy: -46.18 kcal/mol
Frequency: 0.0004
Diversity: 63.50
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((.(((((((((((..........(((((.((...((.((...(((.......)))........)).))...)).))))))))))))............................................................((((((.(.((((.......)))).)))))))...(((...)))....((((..............))))))))))))(..(((........)))....)
Thermodynamic Ensemble Prediction
.(,{(,{,{,(((({((|,...||...,{(({{((({.{,.|||||{||..,,..,|||,,,,,,,,,|||}..,}}}},,,,,}}}}},............................................................((((((.{.((((.......)))).}))))))...(((...)))...,|{{{..,}}}..,...,})})})|}||}},,..|||,,}...}}),},.,,}
Forensic Context

No forensic context available.