Basic Information
Symbol
hsa_SATB2_0014200
RNA Class
transcript (circRNA)
Alias
hsa-SATB2_0105
Host gene
SATB2
Type of circRNA
Intron-Intron
Location (GRCh37)
2:200284049-200284232
UCSC (hg19)
Location (GRCh38)
2:199419326-199419509
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-31.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-37.16 kcal/mol
Frequency:
0.0002
Diversity:
71.88
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.....(((((......))))).))(.(((..((((((.....(((........((((.........((.(((((.((((....))))))))).))(((((..(((((.(((....((((((...))))))....))).)))))..)))))..))))........)))....))))))))).)
Thermodynamic Ensemble Prediction
((({{,.,{{{{..,,,,|||||.,,{|{,,,,{{{|||},..,|||....,,,,||((,......(((({(({(((((((....))))))}),,)))|||,..{((,{,((({,{,(((((({{{||,|,,....|||.}}}}},,}))))}})))).,,.,,,.}},.,,,)))))},,)})
Forensic Context
No forensic context available.