Basic Information
Symbol
hsa_SETDB1_0000500
RNA Class
transcript (circRNA)
Alias
hsa-SETDB1_0050
Host gene
SETDB1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:150900180-150900450
UCSC (hg19)
Location (GRCh38)
1:150927704-150927974
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-69.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-75.02 kcal/mol
Frequency:
0.0002
Diversity:
66.11
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((......))))))(......((((((((((........((.(((....))).)).((.(((((....))))).)).((((((..(((....(.(((((((((((((((.((((....)))).)).))))..)))).))))).)....)))...........((((((......))))))...))))))...((((((.(.(((.(((((.((.((((.....))))..)).))))).)))..).)))))).....)))))))))))
Thermodynamic Ensemble Prediction
((((((......)))))){.....,((((((((((.,{{{{..(({(((....}}}.,..{(.(((((....))))).)}.{||||{,.{||,,..{.(((({{{{{{{((((.((((....)))).))}}))}..,|||.||}}}.}....))}.....,.,,..((((((......)))))}...})}})).},((((((.(.(((.(((((.{(.((((.....))))..}}.))))).)))..).))))))....,)))))))))))
Forensic Context
No forensic context available.