Basic Information
Symbol
hsa_SETDB1_0002000
RNA Class
transcript (circRNA)
Alias
hsa-SETDB1_0021
Host gene
SETDB1
Type of circRNA
Intron-Intron
Location (GRCh37)
1:150903969-150907392
UCSC (hg19)
Location (GRCh38)
1:150931493-150934916
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-52.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-57.67 kcal/mol
Frequency:
0.0002
Diversity:
43.29
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.............)(..((((((((((..((((((((.(.((.....(((((((((((((.(((((.((((.......))))..))))).))))))...........................................................................(((((((((.....))).))))))....((......))))))))).....)).).))))))))..))))))))))..)
Thermodynamic Ensemble Prediction
(.............}|{.((((((((((..((((((((.{.((...,.(((((((((((((.(((((.((({.......})})..))))).))))))}.......................................................{(((......,,,..,...({(((((({.....}))|,)))}},,,.|,,}}.,,}}})))))).,.,.)}.}.))))))))..)))))))))),.)
Forensic Context
No forensic context available.