Basic Information
Symbol
hsa_SETDB1_0007800
RNA Class
transcript (circRNA)
Alias
hsa-SETDB1_0038
Host gene
SETDB1
Type of circRNA
Intron-Exon
Location (GRCh37)
1:150935211-150935640
UCSC (hg19)
Location (GRCh38)
1:150962735-150963164
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-99.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-109.23 kcal/mol
Frequency:
0.0000
Diversity:
167.57
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.....)))(......(((((((((((((....((((.......(((.(((.((.((....)).))..))).)))...(((......)))...)))).....))).))))))))))...(((((((....(((((.((((((....((((................))))....)))))).(((((((...((((((((((((.((((.(((((((.......(((((......)))))....(((...((((...))))..))).))))))))))).))))))(((((((.(........).)))))))..(((((((((.....)))))).)))...((...(((((........))))).)).)))))).....))))))).....)))))..))).))))...(((((((...)))))))...)
Thermodynamic Ensemble Prediction
{{{..,,,|||(,.....(((((((((((((....((({.......{((,{{{.,{,,,....,,.,},,|||.,,,..,}}},,....,}}...)))).....))),,))))))))}...(((((((,,..((((({((,,{,....,((({{{{,,(,{,,,,,{{||||,..,|}||||,{{({{{{|,|,||||{((({{{.{,|{,{{{{(({,|,..,,(((((,,....||||},,,.{{{...{{{{...)))).,})),}}))))))))).)))))))|,,((({(,,..,,,,}.}}}))}|.,,{|||||||...,}))))),,)),,,.{{...{{(((..,.....}}))).,,.))))))).,,.,..,))))}..}))})}..})).))))...{{{|||,...,})))))...}
Forensic Context
No forensic context available.