Basic Information
Symbol
hsa_SHKBP1_0000100
RNA Class
transcript (circRNA)
Alias
hsa_circ_0051095
hsa_circSHKBP1_001
Host gene
SHKBP1
Type of circRNA
Exon-Exon
Location (GRCh37)
19:41082757-41083347
UCSC (hg19)
Location (GRCh38)
19:40576851-40577441
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-96.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-100.21 kcal/mol
Frequency:
0.0040
Diversity:
54.84
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.(.((((((....)))))).).)))....((((..((((((..((.((((.((((......)))).)))).))((((((((....))))))))))))))..))))((((....))))(((((((((.((((.........)))).)))....))))))((((...)))).......)(.((((.(((((((.((((..((.....)).))))...)))..)))).)))).)
Thermodynamic Ensemble Prediction
((((.(.((((((....)))))).).))).,,,(((({.{{{{{|}}||.{|||.((((......)))).)))|.||((((((((....)))))))))))))|{.||||,{{{,,,,|,,,(((((((((.((((.........)))).)))....)))))),|||,,.}},),}}}}..}{.((((.((((({(.((((..{{.....}}.)))).,.))}.})))).)))).)
Forensic Context
No forensic context available.