Basic Information
Symbol
hsa_SHKBP1_0001500
RNA Class
transcript (circRNA)
Alias
hsa_circ_0051106
hsa_circSHKBP1_012
hsa-SHKBP1_0001
Host gene
SHKBP1
Type of circRNA
Exon-Exon
Location (GRCh37)
19:41088257-41089623
UCSC (hg19)
Location (GRCh38)
19:40582351-40583717
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-111.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-117.53 kcal/mol
Frequency:
0.0000
Diversity:
84.39
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((......((((((((...((((((((((((((((((((.(((..(((((((...(((...((((...(((.((.......(((((((....))).))))..)).)))((((.(((((((((.((.((((.(((.......))).).)))..))........)))))))))))))......))))((((.......))))((((((((.........))))))))....(((((........))))))))))))).....))..))).)))))))))))))))..(((.....))))))))..))))))))))))..
Thermodynamic Ensemble Prediction
..((((......((((((((...((((,(((((((((((((((.(((..(((((((...(({,,,,(((.....,}||{{{,{,,,((((((,..(((((...,..,,..||({((({((((((((.({.((({.(({.......))).).))).,))..,..,,,)))))))))))}}....)))))}||||...,..,})})||||||{{........}})))))}}....({{{{.,....,,))))))))))))).....))..))).))))))))))))))).,|||.....}}}}}}}}..))))))))))))..
Forensic Context
No forensic context available.