Basic Information
Symbol
hsa_SHKBP1_0000400
RNA Class
transcript (circRNA)
Alias
hsa-SHKBP1_0011
Host gene
SHKBP1
Type of circRNA
Exon-Exon
Location (GRCh37)
19:41083302-41083536
UCSC (hg19)
Location (GRCh38)
19:40577396-40577630
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-17.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-20.35 kcal/mol
Frequency:
0.0159
Diversity:
36.45
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((...(.((((..((.....)).)))).)..(((((....(((....))))))))))(.((((.((.((..(((((((..................))).....)))))).)).)))).)
Thermodynamic Ensemble Prediction
((..,{.((((,.,,.....|}.}))},},.({((({...(({....}}}}))}}))(.((((.{{.....{{{{{{{.............,....))).....}}))}},)).)))).)
Forensic Context
No forensic context available.