Basic Information
Symbol
hsa_chr19_0261400
RNA Class
transcript (circRNA)
Alias
hsa-SHKBP1_0008
Host gene
SHKBP1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
19:41083486-41084403
UCSC (hg19)
Location (GRCh38)
19:40577580-40578497
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-46.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-49.55 kcal/mol
Frequency:
0.0071
Diversity:
21.67
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((.((((.((((((((((..(((...)))..)))....)))))))(((((((......)))))))(((.((((((..((((.((..((.....))..)).)))).)))))).)))..(((....))).)))).))((......))
Thermodynamic Ensemble Prediction
.((,{(((.((((((((((..(((...)))..))}...,)))))))(((((((......)))))))(((.((((((..((((.((,.((....,)},})}.)))).)))))).)))..{{{....}}}.)))).)){,,,....},
Forensic Context
No forensic context available.