Basic Information
Symbol
hsa_SHKBP1_0000800
RNA Class
transcript (circRNA)
Alias
hsa-SHKBP1_0007
Host gene
SHKBP1
Type of circRNA
Exon-Exon
Location (GRCh37)
19:41084328-41086391
UCSC (hg19)
Location (GRCh38)
19:40578422-40580485
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-92.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-97.56 kcal/mol
Frequency:
0.0001
Diversity:
79.80
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.((.....(.((((((.....((((((...(((((((........)))))))...((((((((((....(((.....)))....))).)))))))....((((.((.(((((...((.((....)).))..))))))))))).(((..(((.((.(((((.((....(((.(..((((((.......))))))..)..))).....)).))))).....)).)))..))))))))))))))).))))))((((.((((...........))))...))))
Thermodynamic Ensemble Prediction
(((.{{,.,..(.{{{{((.,..,({(((({,.(((((((........)))))))...|,|||||,|||,,,{,,{....,.}.|}}..},)))}}},...,((((.{(,(((((...((.((....)).))..)))))))))))}(({..(((.,{.{{(((.{(.{,.(({.(..((((((......,)}))))..),,}||.....}},))))).....,},))}..}))))))))))))))}})})))((((.((((...........))))...})))
Forensic Context
No forensic context available.