Basic Information
Symbol
hsa_SHKBP1_0001400
RNA Class
transcript (circRNA)
Alias
hsa-SHKBP1_0012
Host gene
SHKBP1
Type of circRNA
Intron-Exon
Location (GRCh37)
19:41088106-41096638
UCSC (hg19)
Location (GRCh38)
19:40582200-40590732
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-86.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-92.56 kcal/mol
Frequency:
0.0001
Diversity:
86.48
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
......((((..((((....((((.(((((((.........(((((((((((....(((........)))....)))))))))))..................(((((.((((.((((((((((.....))))))....)))))).)).)))))..))))))).))))(((((((((..(((...((((((....)))))).(((.....)))....))).)))).))))).....(((((((....))).))))..))))))))..
Thermodynamic Ensemble Prediction
({{...{{||,,,((({{{{{{{{.((((((....,,,,,,(((((((((((..{.(((......,.)))....))))))))))).......,,,{{{{{{,{(((((,,,,|}||,||||{(({{{.{||||||{...{||,,...)}))))),..,))),)})))}(((((((((..(({,(((({{{{....|})),,.(((.....)))}}))))).))))))))))...})||||,||,..,}}}.}},,..)},}}))),}
Forensic Context
No forensic context available.