Basic Information
Symbol
hsa_SHKBP1_0003400
RNA Class
transcript (circRNA)
Alias
hsa-SHKBP1_0015
Host gene
SHKBP1
Type of circRNA
Intron-Intron
Location (GRCh37)
19:41095508-41095884
UCSC (hg19)
Location (GRCh38)
19:40589602-40589978
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-134.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-139.33 kcal/mol
Frequency:
0.0002
Diversity:
89.75
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((....(.(((((.((((..(((((.....((((((......((((((...((...(..(((((.(......).)))))..)...))....)))))).........((((.((((.......)))).)))).......((((((.((((..((((......)))).......(((.(.......)))).(.(.(.((((((..(((.....)))..)))))).).).)......)))).)))))).((((((((.(((..(((((.(..(((((.(((((..(((.....)))))))).)))))..).)))))....)))...))))))))....)))))).....)))))))))))))))....))((......))
Thermodynamic Ensemble Prediction
((....{.(((((.((((..(((((.....((((((.,,,..({((({...,|,,.|..|{({{.{,.....||}))}}..}...)),...})}))}.........((((.((((.......)))).)))).......((((((.((((..((((......)))).......{{(.{,{,.......},|,|,(.((((((..(((.....)))..)))))).).}.}......)))).)))))).((((((((.(((..(((((.{.,(((({.(((({,.{((,....})}))))).})))).,).)))))....))}...))))))))....)))))).....))))),))}))))))....))((......))
Forensic Context
No forensic context available.