Basic Information
Symbol
hsa_chr19_0261600
RNA Class
transcript (circRNA)
Alias
hsa-SHKBP1_0016
Host gene
SHKBP1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
19:41097031-41097247
UCSC (hg19)
Location (GRCh38)
19:40591125-40591341
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-78.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-81.53 kcal/mol
Frequency:
0.0038
Diversity:
51.47
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.................))))((((.(((....(.((((((((((....((((((((((....)))))).((((.((.((((.((((....)))))))))).))))..((..((.(((((.((.(....(((..((((((((((....)))))))..)))..)))......).))..))))).)))).))))))))))).))).)))).))))
Thermodynamic Ensemble Prediction
((((.................))))((((.((,....(,((((((((((....((((((((((....)))))).((((.((.((((.((((....)))))))))).))))..((,.((.{{(((,((.(.||.{{(,.,{,(((((({....)))))))..}))}}})},|,}..,,},,,))))}.}})).}}))))))))).))),)))).))))
Forensic Context
No forensic context available.