Basic Information
Symbol
hsa_SHPRH_0001100
RNA Class
transcript (circRNA)
Alias
hsa-SHPRH_0138
Host gene
SHPRH
Type of circRNA
Intergenic-Exon
Location (GRCh37)
6:146185524-146242528
UCSC (hg19)
Location (GRCh38)
6:145864388-145921392
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-39.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-44.57 kcal/mol
Frequency:
0.0004
Diversity:
54.09
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((........))))(..........(((((........((((.....((..((((((.((......)).)))))))).(((((.....))))).........................................................((((.((((((......))))))))))...)))).......)))))((((...((((.((..((((((........)))))))).)))).))))...)
Thermodynamic Ensemble Prediction
.((((..((((((..,,.......{{.(((((((...{..((((.....{(..((((((.((......)).)))))))).(((((,...,))))).........................................................{({,{{{({{,......)))))))))}...))))..}.}}.}))))||...))))})..}))}{(,(({{{.{{{.|,,,,},)}))..})))}..,,
Forensic Context
No forensic context available.