Basic Information
Symbol
hsa_SHPRH_0007200
RNA Class
transcript (circRNA)
Alias
hsa-SHPRH_0144
Host gene
SHPRH
Type of circRNA
Intron-Intron
Location (GRCh37)
6:146219431-146219677
UCSC (hg19)
Location (GRCh38)
6:145898295-145898541
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-42.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-47.33 kcal/mol
Frequency:
0.0002
Diversity:
71.61
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...............)((..((((((((.........((((((.......))))))(((((.((((((..((...(.((((((((((((......))).)))).....))))))...))..)))))).....(((..((((((((((...))))))))))..))).(((((.....)))))...)))))......(((((....(.(((((......))))).)...)))))..))))))))..))
Thermodynamic Ensemble Prediction
(...............}((..({((((((........||||||{.,.....))}|||{{{,..{{{{{{..{{..,{.{{{{((((((((......))).))))}....,}}})}}..}|,,|}|||},....{{,..((((((((({...}))))))))),,||,.(((((.....})))),,|}|},.....,..||||,,,.,.{((((......))))).}...)))))..})))))))..))
Forensic Context
No forensic context available.