Basic Information
Symbol
hsa_SLC8A1_0014100
RNA Class
transcript (circRNA)
Alias
hsa-SLC8A1_0197
Host gene
SLC8A1
Type of circRNA
Intron-Intron
Location (GRCh37)
2:40541393-40542150
UCSC (hg19)
Location (GRCh38)
2:40314253-40315010
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-125.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-139.88 kcal/mol
Frequency:
0.0000
Diversity:
292.86
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.....(((((((.....(((((..((((((...(((((.(((((((((((..(((....((((.(((((.(((.(((((....((((((((((...(((((((.((((......(((((((.......(((((........)))))......)))))))(((((....(((((((.(((.......((((.((((.......)))).)))).......)))))))))).......)))))........((((.((((.............)))).))))..(((((((....((.(((((....((((..................((((....)))).............(((......)))))))...))))).))...)))))))....)))).))))))))))))))))))))......)).))).))))).)))).)))..)))))))((((((.(......).))))))...))))))))).))))))..))))).......((((((((((.........((((((.((((((.(((((((...((.((((..(((..................)))..)))).))...))))))))))))).)))).))......((((((((((.((................)).))))............((((....))))..))))))))))))))))..)))))))..(((((.(.((((..((((((...))))))....)))).).))))).
Thermodynamic Ensemble Prediction
{{.{,(((((((((......}}............,...{(({.,,|))|...(((((...,...,|||||,{({({.,.....{{{{(((((({{,((,,,,({((((....,(((((...,({,{{,,{(((,{{.,{,.|,||}..,.|||||,||||||||,|||||,,{,{{{{,.......(((({((,,..}}}}})),.......))}}.,||{|||||,,.....,,}},,,.,,,..,,|||{,,{,,..........,..|||{{|||...(((((((....((.(((((...,{{({...,,,...,,,......,|||.,..,}}}..,,...,.....(({......))))))).,.))))).))...)))))))....||},.|}}},}}|}}}},,,,,,,}}}},,,||||||{|,||}|}}||,}||..|||||||(,,.{{|{,.....,..||||{{{{||||||,,..||||,..{(((,{{{.....((((.((((....})))..)}}}.,.}}|.}}}||}}}|,.}}}}}}}}},,}}|,,,...,||||..,,,}.|||{.,,,)})),,}}}}}}},})))}}.,}}|,||..,}}}||,}|}))|}})|......,}}},..,..}}.}}}},..{|{......|||{{{{.,,,,.)))}....}}))))))),.}))))))..|{||,,{{(((({.(((({{...}))))}.,},)))),)})})}}.
Forensic Context
No forensic context available.