Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_SLC8A1_0018700

RNA Class

transcript (circRNA)

Alias

hsa-SLC8A1_0192

Host gene

SLC8A1

Type of circRNA

Intron-Intron

Location (GRCh37)

2:40604747-40604892 UCSC (hg19)

Location (GRCh38)

2:40377607-40377752 UCSC (hg38)

External Database

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-17.90 kcal/mol

Thermodynamic ensemble

Free Energy: -22.00 kcal/mol

Frequency: 0.0013

Diversity: 35.20

MFE Structure Visualization

MFE Structure Prediction

(.(((((((...((.....)).))).))))..((((((((..(((((.(((...(((.........)))....))).)))))))))....))))(((((((((....)))))))))..............)(((.........)))

Thermodynamic Ensemble Prediction

(,(((((((...{,.....}}.))).)))),.{{{{((({.{(((((.(((...(((.........)))....))).)))))))))....}|||{((((,,,,,,,.,|||||}|,....,|||,...,,,}}}))},,,..,,.}