Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_SLC8A1_0023000

RNA Class

transcript (circRNA)

Alias

hsa-SLC8A1_0042

Host gene

SLC8A1

Type of circRNA

Intron-Exon-Intron

Location (GRCh37)

2:40655613-40659437 UCSC (hg19)

Location (GRCh38)

2:40428473-40432297 UCSC (hg38)

External Database

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-8.50 kcal/mol

Thermodynamic ensemble

Free Energy: -11.05 kcal/mol

Frequency: 0.0159

Diversity: 20.76

MFE Structure Visualization

MFE Structure Prediction

.....(((((((((....)))))).)))(((((((((.((((.......)))))))....))))))...........

Thermodynamic Ensemble Prediction

{{.,,(((((((((....)))))).))}|||{||(({.,((({...,{{{}}},,,..,}))}}},.}}},....)}