Basic Information
Symbol
hsa_SLC8A1_0003600
RNA Class
transcript (circRNA)
Alias
hsa-SLC8A1_0280
Host gene
SLC8A1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
2:40366541-40509351
UCSC (hg19)
Location (GRCh38)
2:40139401-40282211
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-34.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-38.82 kcal/mol
Frequency:
0.0004
Diversity:
49.39
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((((((......(((.((((((.....)))))).........((.(((((((..((((.((((.((((.......)))).))))..((.....))....................................................)))).)))).))).)))))......)))))))).....(((((((((....(((((((((.(((....)))..))))))...)))...)))).)))))
Thermodynamic Ensemble Prediction
...((((({{{......,{{.((((((.....)))))).,.......,,.||.,,.,..,.....,,{.((((,..,,,,|||}.}}}}.,}|,.,,,}....................................................,{{{,...|)})}..,}}}}..,,,.)))))))).....{((((((((..,.(((((((((.(((....)))..))))))...})),,.)))).)))))
Forensic Context
No forensic context available.