Basic Information
Symbol
hsa_ARHGAP19-SLIT1_0000700
RNA Class
transcript (circRNA)
Alias
hsa-SLIT1_0054
Host gene
SLIT1
Type of circRNA
Intron-Intron
Location (GRCh37)
10:98771187-98771528
UCSC (hg19)
Location (GRCh38)
10:97011430-97011771
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-121.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-125.98 kcal/mol
Frequency:
0.0003
Diversity:
50.46
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((.(......).)).))))(.(((((((.........(((.(((((((((((((((.....)))))).........((((((((......))))))))(((((((..(((....((((..(.((..((((...))))..)).)..))))..((((((.((.(((((((........))))))).))((((((((((((...................)))))......))))))).(((....)))..(((((......))))).)))))).)))..))))))).............((((((((...))))))))))))))))).)))))))))).)
Thermodynamic Ensemble Prediction
((((((.(......).)),})))(.(((((((.........(((.(((((((((.,{{{{.....}}}}|,,.,,.....{(((((((......)))))))|(((((((..(((....{(((..(.((..((({...}))),.)).}..)))}..((((((.((.(((((((........))))))).))((((((((((((...................)))))......))))))).(({....)))..{((((......))))}.)))))).)))..))))))),....,,......,{{{{{,,...))}))))}))))))))).)))))))))).)
Forensic Context
No forensic context available.