Basic Information
Symbol
hsa_ARHGAP19-SLIT1_0004000
RNA Class
transcript (circRNA)
Alias
hsa-SLIT1_0060
Host gene
SLIT1
Type of circRNA
Exon-Exon
Location (GRCh37)
10:98823212-98823996
UCSC (hg19)
Location (GRCh38)
10:97063455-97064239
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-66.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-72.36 kcal/mol
Frequency:
0.0001
Diversity:
72.53
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((................((((.......(.(((((((((.............)))))..)))))..((((.(((.(((...((((......(((((..((((.......))))..)))))))))..))))))))))........(((((.((......)).)))))((((..((......))..)))).....))))))).))))(.((..(((.......)))..)).)
Thermodynamic Ensemble Prediction
(((((((...........................{.(((((((((,,......,}...)))))..)))),..{((,,(((.(({.{.((((......(((((..((((.......})))..))))))))).|)))))))))},,...,...((((,|,.{{{.|||.|||.||||}..})))}}}}).)})))},...,))))))).))))(.{{..(((,,,,...})),,)).)
Forensic Context
No forensic context available.