Basic Information
Symbol
hsa_ARHGAP19-SLIT1_0004100
RNA Class
transcript (circRNA)
Alias
hsa-SLIT1_0052
Host gene
SLIT1
Type of circRNA
Exon-Exon
Location (GRCh37)
10:98823212-98824633
UCSC (hg19)
Location (GRCh38)
10:97063455-97064876
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-107.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-113.72 kcal/mol
Frequency:
0.0001
Diversity:
77.37
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(..((((((..........((.((((((((((((..((((((....).)))))(((((((.(((.((((.......((.....)).......)))).))))))))))(((((((((.............)))))..))))...((((.(((.(((...((((......(((((..((((.......))))..)))))))))..))))))))))....((((((((((((...(((.......)))...))..)))))).)))))))))))))))).)).))))))..)..(((((......))))).
Thermodynamic Ensemble Prediction
.(,,((((((..........{(.((((((((((((.,((((((,...|,|}},,(((((((.(((.((((.,,....((.....}}.......)))).))))))))))(((((((((,........}...)))))..))))...(((,,(((.(({.{.((((......(((((..((((.......))))..))))))))).})))))))))).....,,,.||||||},{{(,({{.{{{.|||,...})))))))).)))})))))))))))).,,,)))}}}..,..|{{||,,,,,,)}}}}.
Forensic Context
No forensic context available.