Basic Information
Symbol
hsa_SMARCC1_0019800
RNA Class
transcript (circRNA)
Alias
hsa-SMARCC1_0188
Host gene
SMARCC1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
3:47719688-47761536
UCSC (hg19)
Location (GRCh38)
3:47678198-47720046
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-38.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-44.71 kcal/mol
Frequency:
0.0001
Diversity:
91.22
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.(((..........(((......)))((((((.((......)).))))))...)))..))))(...(((..((((((((((((((.((((((((((..((((.........)))).........((((((.(((((((((.........))))...(((.......))).......))))).)))))).((.(((...))).))..))))))))))...)))))...))))))))))))..)
Thermodynamic Ensemble Prediction
(,,,.,,.......,{{{(((......))}{{|||,.{{{{{{{,||.|||}||,.|,,{{.||||{.,..,|,,||{|||||||||||}||||||||||..((((.........))))...{||{{,{(((((.(((((,,,{.........||||,,.{{{..,,,,,)}}.......))))).)))))}..,.{{{,,,}}},}|,,}}}},,}}}}.},))))}.)})}})))))),,,.,)
Forensic Context
No forensic context available.