Basic Information

Symbol
hsa_chr5_0228200
RNA Class
transcript (circRNA)
Alias
hsa_circ_0128301 hsa_circSPINK5_002 hsa-SPINK5_0002
Host gene
SPINK5
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:147468917-147473305 UCSC (hg19)
Location (GRCh38)
5:148089354-148093742 UCSC (hg38)
External Database
circbank circBase

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-35.80 kcal/mol
Thermodynamic ensemble
Free Energy: -39.62 kcal/mol
Frequency: 0.0020
Diversity: 41.90
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.....(((..((((((((..(((((....)))))..(((((...............((....))....((((((...................))))))......................................................))))).....((((..(((((........)))))..)))).))))))))....)))(((((.((.....(((((....)))))......)).)))))
Thermodynamic Ensemble Prediction
....,(((..(((((((({,.,,.{,,,,||((((.(.(((..............})}.,.}))}...{{{{{,..................,||||}|,.......................................................))||,}|},{{{,.{||||......,.}))))..}}))})),)))))..}.)))(((((.((,,...(((((....)))))...,,.)).)))))
Forensic Context

No forensic context available.