Basic Information
Symbol
hsa_chr5_0228300
RNA Class
transcript (circRNA)
Alias
hsa_circ_0128302
hsa_circSPINK5_001
hsa-SPINK5_0006
Host gene
SPINK5
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:147468917-147499871
UCSC (hg19)
Location (GRCh38)
5:148089354-148120308
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-32.78 kcal/mol
Thermodynamic ensemble
Free Energy:
-37.45 kcal/mol
Frequency:
0.0005
Diversity:
56.85
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((((((((....))))))))..(((((((..(((((......(((((.........))))).......(((......)))((((((.((((((...........................................................))))))...))))))..))))))))))))...((((.....))))....))..(((((.((.....(((((....)))))......)).)))))
Thermodynamic Ensemble Prediction
.,(((((((((,....}))))))}..,{,((((....|||,.....{(((,......{,.,|||,.......,{,...,.{{{{((((((.((((((...........................................................))))))...)))))).)))}.,,},}}))...{(((.....))))....))..{((({.{{,|..,||||(....})))}....,.)).)))))
Forensic Context
No forensic context available.