Basic Information
Symbol
hsa_chr5_0227800
RNA Class
transcript (circRNA)
Alias
hsa-SPINK5_0017
Host gene
SPINK5
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:147432397-147480160
UCSC (hg19)
Location (GRCh38)
5:148052834-148100597
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-37.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-41.42 kcal/mol
Frequency:
0.0011
Diversity:
50.97
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((....))((.(((((((((..(((((.((.((((.(.((((((......)))))).))))).)).((.(((((.((((...)))).))))).)).........................................................(((...))))))))...((((((......))))))..(((((......)))))((.((((...((.....))...)))).))..)))).)))).).))
Thermodynamic Ensemble Prediction
((....))((.(((((((({..(((((.{,.((((.(.((((((......)))))).})))}.}},((,{{(({.{(({...}})}.})})).}).........................................................|{|...)))))))}...((((((......))))))..(((((......)))))...{{{....||.....,,..,},,..,,,,)))),}))).).))
Forensic Context
No forensic context available.