Basic Information
Symbol
hsa_chr5_0228000
RNA Class
transcript (circRNA)
Alias
hsa-SPINK5_0010
Host gene
SPINK5
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:147439017-147473305
UCSC (hg19)
Location (GRCh38)
5:148059454-148093742
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-32.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-35.02 kcal/mol
Frequency:
0.0103
Diversity:
36.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((......)))(((((((..........((((((((((.................((....))....((((((...................))))))........................................................((((((......(((....)))......)))))).((((........))))...........))))).....))))).........)))..))))
Thermodynamic Ensemble Prediction
(((......)))(((((((..........((((((((((.................{{....}}....{(((({...................)))))}........................................................((((((......(((....)))......)))))).,.,,......,.|}|...,,.......))))}.....))))).........}}}..})))
Forensic Context
No forensic context available.