Basic Information
Symbol
hsa_SPTA1_0000900
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0052
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158585006-158606551
UCSC (hg19)
Location (GRCh38)
1:158615216-158636761
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-78.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-82.79 kcal/mol
Frequency:
0.0013
Diversity:
60.11
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.....((((....(.((((..((((((......))))))...(((((((.(((((...))))).)))))))...((((((.(((....)))((((((((..(((((.((((((((((((((......)))))..))))))...((((.........))))))))))))((((..((....))..)))).)))))))).))))))....)))).)....)))).........(((....)))..
Thermodynamic Ensemble Prediction
{.....,{{,,.,{{({(,,,((((((......)))))}...(((((((.(((((...))))).)))))))..{{{,,,(.(({...,}}}|{{{{{|{|.(((((.((((((((((((((......)))))..))))))...((((.........)))))))))))){|{{..{{....))..)))).}))})))).}}}}}},,..},)|{|{...}|||{,..,.,})|||....,))))
Forensic Context
No forensic context available.