Basic Information
Symbol
hsa_SPTA1_0002100
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0053
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158589012-158590256
UCSC (hg19)
Location (GRCh38)
1:158619222-158620466
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-125.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-135.17 kcal/mol
Frequency:
0.0000
Diversity:
111.78
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((.(((..(.(((.......))))..)))))))))((((..(((.....)))..))))............(((.(((..(((((...((((.....(((.(((((..(((.((....)).))).......((((.((....)))))).((((((..(((((.(((((((.......))))))).))))))).))))(((((....((.((((((...(((((((((((((....(((.....)))..)))).))))).))))))))))..))....)))))...))))).))).))))..)))))..))))))(((((((..((..((((.(((...........))).)))).((.((((.....)))).)).))..)))))))........)((((...))))
Thermodynamic Ensemble Prediction
(((((((.(((..{.(((.......)))}..)))))))))|(((..{({.....}}}..}}}}...........,{((,(((..(((((.,.((((.,{(,{((,((({,..||||({,{,{|||||{{(.((....)).}}}}},|{|{{|.((((((,.{((((.(((((((.......))))))).)))))}}.)))){{|{,..,}||}{(((((...(((((((((((((.,,.(((.....))),,)))).)))))))})))))))}..)),},,,}))),,,}}}}}|})),}})),.))})}..))))},,{{{.{,.((({..,{,.{((,.{{{((((({......))}}}})))),,.,....))))..}.}))|||,,....)},.)((((...))))
Forensic Context
No forensic context available.