Basic Information
Symbol
hsa_SPTA1_0002300
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0089
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158589012-158606551
UCSC (hg19)
Location (GRCh38)
1:158619222-158636761
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-38.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-43.41 kcal/mol
Frequency:
0.0003
Diversity:
71.25
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
......((((..((.(((...........))).....(((((..((((....(((((......(((((......)))))..)))))))))..))))).(((((((..((..((((.(((...........))).)))).((.((((.....)))).)).))..)))))))...))..)))).........
Thermodynamic Ensemble Prediction
..{{..((((,....(((...........}}}...{{{,{.,,}|{{|||..,|||||..,||{{(((,.....|||||..}|,|{(||,.,))})..,((({({.{{({.,,{{.{((,.{,,,{||{{,,,.,,)),||,||||,..,.,,,)})).,}.,))))))}...,}}.})|||,...))))
Forensic Context
No forensic context available.