Basic Information
Symbol
hsa_SPTA1_0004300
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0152
Host gene
SPTA1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
1:158604333-158633288
UCSC (hg19)
Location (GRCh38)
1:158634543-158663498
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-64.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-68.83 kcal/mol
Frequency:
0.0005
Diversity:
54.41
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..((....))...((((((((((......))))))...(((((((.(((((...))))).))))))).((......)).......((.((((((((.(((((((.(((..((.((((((.((((..((((.....((((..((....(((....((((.(((...)))))))...)))....)).))))))))...)))..).)))))).))....)))...)))))).)...)))))))).)).)))).
Thermodynamic Ensemble Prediction
..((....}}...{{{{((((((......))))))...(((((((.(((((...))))).))))))).{{......,|({.{{{,{(.((((((((.{((((((.(((..((.((((((.{(((..(((({,.,..(((.,{{....(((,,..((({.{{{,..)))))))...}}),,..)),}}})))))...}})..}.)))))).))....)))...)))))).}...)))))))).)}.)))),
Forensic Context
No forensic context available.