Basic Information
Symbol
hsa_SPTA1_0005900
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0022
Host gene
SPTA1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
1:158609372-158624741
UCSC (hg19)
Location (GRCh38)
1:158639582-158654951
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-84.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-90.85 kcal/mol
Frequency:
0.0000
Diversity:
60.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((..(((((((((...))).)).).)))..))).).)).(((((.((.(.((((((.(((...(((((.((((((........)))...((((((.(.....(((((....((((((((((((..................(((.(((..(((.(.....).)))...))).)))...........((((((((...))))))))))))))(((((.(((...((.((((((.(((....))))))))).))))).))))))))))).......)))))....).)))))).))).))))))))))).)))))))))))
Thermodynamic Ensemble Prediction
{(((((..(((((((((...))),,).).)))..))).).},.(((((.(,{(.((((((.(((...(((((.(({(((........)))...((((((.,.....{((((.,,.((((((((((((......,...........(((.(((..(((.(.....}.))}...))).)))..,........((((((((...)))))))))))))){{|||,|||...((.((((((.(((....))))))))).))}}}.|}}|}}})|||...,,,.))}}},..,).)))))).})).)))))))))))}}))))))))))
Forensic Context
No forensic context available.