Basic Information
Symbol
hsa_SPTA1_0006000
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0105
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158609660-158612332
UCSC (hg19)
Location (GRCh38)
1:158639870-158642542
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-65.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-70.37 kcal/mol
Frequency:
0.0005
Diversity:
66.52
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((......(((......))).((.(((.((.....))))).))))..(((((((((((..(((....)))..)))))(((....)))..............((((((((((((.........)))))....((((..(((..((.((((......(((((((.((.(((..(((..(.......)..)))..))).))..)))))))....)))).))...)))..))))..)))))))..((((((((...))))))))..)))))).
Thermodynamic Ensemble Prediction
{({.....,|{(..,,,,,,|{(({.(((((.{{.,{(((,....)}}|||,..}}.)))}}.}}.}}}.((({.,.((((....)))}}.)))}}))}.,}((((((((((((.........)))))....((((..(((..((.((((..,...(((((((.((.(((..(((..,.......}..)))..))).))..)))))))...})))).))...)))..))))..)))))))..((((((((...))))))))|||},,}})
Forensic Context
No forensic context available.