Basic Information
Symbol
hsa_SPTA1_0007100
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0043
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158614043-158618443
UCSC (hg19)
Location (GRCh38)
1:158644253-158648653
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-83.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-89.55 kcal/mol
Frequency:
0.0001
Diversity:
64.74
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((.((.((((((....(((((((((..((......((((((..((((....)).))..)))))))).))))))))).))).)))..))))))..(...(((((((..((((((..(((((.(((((.(((((((((.((...)).))))))))).))(((.((((((((...))))...)))).)))...)))...)))))...(((....)))......(((..(((..((((.(...((((...))))...).))))..))))))))))))..))).))))..)
Thermodynamic Ensemble Prediction
.({(({{{.((((((....((((((((({{,.......((((((..((((....)).))..)))))))),))))))))).)))}|||.|}}|}}|.,{...(((((((..((((((..(((((.(((({.(((((((((.((...)).))))))))).}}(((.(((({(({...,)))...)))).))).,,)))...)))))...(((....)))......{((..{{,..((((.(...((((...})))...).))))..)},))}))))))..))).))))..}
Forensic Context
No forensic context available.