Basic Information
Symbol
hsa_SPTA1_0008600
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0115
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158621157-158623215
UCSC (hg19)
Location (GRCh38)
1:158651367-158653425
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-61.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-66.85 kcal/mol
Frequency:
0.0002
Diversity:
83.89
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...((.((((.(((((((((((((..(((((.((((...(((....(((.......)))..)))..))))..)))))((((.(((((((((....(((((..........))).((........))..))....))))))..))).)))).....((((...((....(((....)))...))...))))...))))))).....)))))).(((((....(((((......)))))....))))))))).)).
Thermodynamic Ensemble Prediction
,.{(({((,..(((({.,(((({{{,,((((.(((({{{((,{{{{(({,{,....,)),,)})}})},,}})))),,,{|}|||||,||,..,}||(((..,.......))).{,......},})..,)}}},)}}|||,{|||.}}}}.....{{({,,.((....(((....)))...)).},)}},...|||||}}.....}))))),{((({.,..(((((......)))))...}))))}))|,.}.}
Forensic Context
No forensic context available.