Basic Information
Symbol
hsa_SPTA1_0010400
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0060
Host gene
SPTA1
Type of circRNA
Intron-Intron
Location (GRCh37)
1:158624601-158625363
UCSC (hg19)
Location (GRCh38)
1:158654811-158655573
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-56.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-62.70 kcal/mol
Frequency:
0.0001
Diversity:
80.24
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((...)).(((.((((((((.............)))..........((((((((.(.((((.((.((((.((.....((.((...(((.(.((((...((.(((((.....)).))).))..))))).)))..)).)).....)))))))).)).)).)..))))))))((..(((((((((......)).)))))))..))((..((((((((.......))).)))))...))......))))))))
Thermodynamic Ensemble Prediction
((...}}.(((.((((({{{.............,||.,,.......{(((((((.{.{(({.{{.((((.((.....((.((....{{,(.((((.{.((.(((((.....}},,)).)}..}}})},}}),,)}.)).....))))))}}.}},)}.,..)))))))}....|{(((((({......}}.,)))))),,|||{,,{{{||||||||},,,))},|}}}}...)).,,...))))))))
Forensic Context
No forensic context available.