Basic Information
Symbol
hsa_SPTA1_0011600
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0129
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158626354-158653286
UCSC (hg19)
Location (GRCh38)
1:158656564-158683496
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-115.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-123.53 kcal/mol
Frequency:
0.0000
Diversity:
112.77
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.................))))(((..((((((.(.............((((....))))((((((((........((...((((..((.(((..((((((((((((...(((((...(....)...)))))..)))))....)))))))....))).))..))))...)).((.(((((((...))))))).)).........(((..(((.......)))..)))....))))))))((((........))))..((((.....))))......(((((....((((((..(((...(((.....)))........(((((..(..(((((.(((....))))))))..)..))))).))).))))))....)))))...((((((((....))).)))))).)))))).....(((((....))))).)))
Thermodynamic Ensemble Prediction
((((.................))))(((..((((((.{,,...,....,,.((((....))))||{{(({,........(((.((((.((((({...}))))).)))).))).........(((((....))))){{((({,...,}}||{{({..{|||{{{..,,|}||.}}.|,.,((((((...))))))|{||,{|||{|,.(((..(((.......)))..)))....}}}}}}}}((((,,...,,.))))..((((.....)))).....|||{((.,,.{{{{({..(({...((({......}}}.},,}}||{((..{..{{{||,|||,.,,))}}}}}}..},,)))}},)))})}}}}}.,,.}}}}||,.{{{{{{{{....))).))))),.)))))).....(((((....))))).)))
Forensic Context
No forensic context available.