Basic Information
Symbol
hsa_SPTA1_0011800
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0130
Host gene
SPTA1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
1:158627262-158655137
UCSC (hg19)
Location (GRCh38)
1:158657472-158685347
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-54.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-59.16 kcal/mol
Frequency:
0.0006
Diversity:
47.07
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((((((((((.....)))))).(((.((.((((....)))).)))))....)))))...))(.(((((.(((((((.(((..(((.......)))..)))...((((((((.((((........))))..((((.....)))).))).))))).........((.(((.....(((......))).....))).))........))))))).))))).)
Thermodynamic Ensemble Prediction
({.{(((,((((((.....)))))).(((.((.{(((....)))}.)))))...,||||}..,))|.{((((.(((((((.(((..(((.......)))..)))...{(((((({.((((,,...|,,))))..((((.....)))).,}}.)))}||,.......,..,{{.,..{(((......)}}.},,,))),)),.,.....))))))).))))).)
Forensic Context
No forensic context available.