Basic Information
Symbol
hsa_chr1_0235000
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0132
Host gene
SPTA1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
1:158627299-158631140
UCSC (hg19)
Location (GRCh38)
1:158657509-158661350
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-52.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-57.65 kcal/mol
Frequency:
0.0002
Diversity:
69.48
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..........((((((.((.........)).)).)))).((((.....))))((((((((......(((.((.(((......(((..(((((...)))))..)))...))).)).)))((((((((............((.((((....)))).))((((((......)))))).(((((((((............)))))))))....)))))))).......(((((.....)))))))))))))...
Thermodynamic Ensemble Prediction
,,,,......||}}({.,{,........||.||,|||..((((.....))))((((((((,,...{(((,((.{{(......(((..(((((...}))))..)))...))).}).}))|,((((,,.}}}}....,{{((.((({....}))).)},|||{(..,,..}}}}}}.{((((((((............))))))))}....,,,,},}}...,....}},,},))))}}),})))))))...
Forensic Context
No forensic context available.