Basic Information
Symbol
hsa_SPTA1_0012300
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0161
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158631077-158650519
UCSC (hg19)
Location (GRCh38)
1:158661287-158680729
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-43.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-48.64 kcal/mol
Frequency:
0.0002
Diversity:
57.84
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((.((((....((((..(((((..((....))((((((((...((((.((((.....)))).))))....(((((...(..((((...))))..)...))))).(((.((.....)).))).....))))))))...)))))))))....)).)).)))).))((......(.((((((........((.(.(.(((...........))).))))........)))))).)..))
Thermodynamic Ensemble Prediction
((((((.({((....((((.,(((((.,((....}}|((((((,,..((((.((((.....)))}.})))..,.||||{..,|..{(({...})))..,...|}}||.(((.((.....)).))),,...})))))),...)))))))))....)).}}.)))).))((......(.((((((....,...{(.(.{.(((...........))).)})}........)))))).)..))
Forensic Context
No forensic context available.