Basic Information
Symbol
hsa_SPTA1_0014000
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0063
Host gene
SPTA1
Type of circRNA
Exon-Exon
Location (GRCh37)
1:158639198-158653286
UCSC (hg19)
Location (GRCh38)
1:158669408-158683496
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-123.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-133.70 kcal/mol
Frequency:
0.0000
Diversity:
123.88
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((....................))((((..(((....)))........(((.(((....))))))...........((.((.............)).))(((((((..(((..((......))..))).((((((((.........)))))))).((..(((((((((...((((..((((((((((..(.....)..)))))))))).)))))))))))))..)).............(((((......)))))(((((.....))))))))))))....((((((((..........(((.((((....((((((...))))))...)))))))((((((.....((...)).....))))))....((..(((.(((...(((((((((.....)))).)))).)...)))..)))..))..))))))))............((((..((.....))..)))).))))
Thermodynamic Ensemble Prediction
{(,.....,{.....,,,,..|||((((..(((....)))........((,{(((....)))))}..,,.......}},|||,,,,..,,{|{.,,.||||||{||||(((,.((......}}..}}},{(((({(,...,.,}},||||||,,.(({.((((((((({..((((..((((((((((.,(.....).,)))))))))).)))))))))))))..,}....{{((({{,.(((((......))))),{{{,.....,||||....}}},}}}}}}|||.{,.....}}..(((.{(((,{,.((((((...)))))),)})))))))((((((.....({...}}..,..)))))).{({(.{{((,{{,..,}.)))).)))}....,,,.,})),.}}}})))}}}))......|||}.|||,{...........))})})}}.}}}}}..,}},.}}}}
Forensic Context
No forensic context available.