Basic Information
Symbol
hsa_chr1_0235300
RNA Class
transcript (circRNA)
Alias
hsa-SPTA1_0041
Host gene
SPTA1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
1:158647192-158647551
UCSC (hg19)
Location (GRCh38)
1:158677402-158677761
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-69.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-77.31 kcal/mol
Frequency:
0.0000
Diversity:
96.15
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((....((((((((.(((...(((((................)))))..))).))))))))((((((.(((((...(((.......(((....))).......)))....))))).)))))).......(((.((((((.(((((((.((((....)))).).....))))))(((((((....))))))).((((((((((.......)))))))))).((((((............)))))).)))))).))).((.(((((........)))))..))...)))(((((..(((.(((..(((((...............)))))((((((...))))))..))))))...)))))
Thermodynamic Ensemble Prediction
(((,,,.(((((((({(((...(({{{.....,,,,..,,,,,))}))..}}}.}}}}}}|,,{{{{{,{{{{{,........,,,.{((....}},.....{(,,,..,,.}}}}.},}))).,,|||,{((.((((({.(((((((.((({....)))).}.....))))))(((((((....))))))).(((((((((((....,})))))))))).((((((............)))))).)))))).))}.{{.(((((........))))).,))...}))(((((..(({.{({.,{{{{({{{,.....,})},.|}}}|((((((...})))))..))))))...)))))
Forensic Context
No forensic context available.