Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_STRN3_0005800

RNA Class

transcript (circRNA)

Alias

hsa-STRN3_0129

Host gene

STRN3

Type of circRNA

Intron-Exon-Intron

Location (GRCh37)

14:31386154-31394745 UCSC (hg19)

Location (GRCh38)

14:30916948-30925539 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-23.71 kcal/mol

Thermodynamic ensemble

Free Energy: -27.10 kcal/mol

Frequency: 0.0041

Diversity: 59.96

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((..((((((.......(((....(((....)))....)))..........(((((...(((((((..(((((((((((((....(((((.........................................................)))))..))))))...))))))).(((((...)))))...........)))))))......)))))....)))))).))).......((....))..

Thermodynamic Ensemble Prediction

.....(((..((((((.......(((.,..(((....)))....)))..........(((((.,,{(((((({.((({,,,{{{{{{....{{{{{.........................................................,}}}|,,|}}}}}..})))))|||((((({..,,,,}.......,..,))))))),.....)))))....)))))).)))....,,.{|...,))},

Basic Information

Secondary Structure

Structure Prediction

Forensic Context