Basic Information
Symbol
hsa_TPCN1_0000200
RNA Class
transcript (circRNA)
Alias
hsa_circ_0028471
hsa_circTPCN1_001
hsa-TPCN1_0001
Host gene
TPCN1
Type of circRNA
Exon-Exon
Location (GRCh37)
12:113664533-113698297
UCSC (hg19)
Location (GRCh38)
12:113226728-113260492
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-129.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-135.14 kcal/mol
Frequency:
0.0002
Diversity:
98.84
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...(((((((..(((((.((((((((...(((..((((((((....)))).....)))).))).....)))))))).))))).((((((((((...)))))..)))))(((((...............))))).(((.((((((((......)).)))))).))).......(((((.(.(((((...))))).).)))))....(((((((((((......(((....))).....))))((((....))))...........)))))))((((((....((...((((.((.(((......))))).)))))).....)))))).............)))))))....)((......))
Thermodynamic Ensemble Prediction
{,,.(((((({..(((((,((((((((.,.(((.,(({{((((....)))).....}))).))).....)))))))).}}}},.((((((((((...)))))..))))){{({(,,,..,.......,,||}}|,(((,((((({((...,,,||,}}||||.}}}..,||},{((((.(.(((((...))))).).))))),,..((({((((||,......(((....))).....}}))({{|....)))),,}},.,,,,}}))))))((((({....,|.,|((((,((.(((......))))).))))},.....})))))..........|},)))))))....){{......))
Forensic Context
No forensic context available.