Basic Information
Symbol
hsa_TPCN1_0005600
RNA Class
transcript (circRNA)
Alias
hsa_circ_0028491
hsa_circTPCN1_023
hsa-TPCN1_0017
Host gene
TPCN1
Type of circRNA
Exon-Exon
Location (GRCh37)
12:113711037-113714840
UCSC (hg19)
Location (GRCh38)
12:113273232-113277035
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-70.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-74.72 kcal/mol
Frequency:
0.0006
Diversity:
47.60
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((....))))))....((((((((((((((.........(((....))).........))))).)))))))))..........((((.....))))............(((((.((((((..(((....)))..)))...))).)))))..))((((((((((.(((((...)))))......(((.((((...((....)))))))))..(((....)))..((((...))))....((((.((.....)).))))...))))))))))
Thermodynamic Ensemble Prediction
((,{{(((,...,|||||,...((((((((((((((.........(((....))).........))))).)))))))))..........,.((,,{{...))},}.|,{.....,{{{,,|||{{{,,|||,,..)}),,)}}...||,.,)))}..))((((((((((.(((((...)))))..,,,.(((.{(({,..,,....}))))})))..{((....))}..((((...))))....((((.((.....)).))))...))))))))))
Forensic Context
No forensic context available.