Basic Information
Symbol
hsa_TPCN1_0001000
RNA Class
transcript (circRNA)
Alias
hsa-TPCN1_0046
Host gene
TPCN1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
12:113683717-113704161
UCSC (hg19)
Location (GRCh38)
12:113245912-113266356
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-58.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-62.57 kcal/mol
Frequency:
0.0016
Diversity:
61.30
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((.(((..(((((.....)))))..)))..((.(((((..(((....))).....))))).))))))).)(.((..((((((((.....((((((........................................................((........)).((.((((....)))))).((.((....)).)).))))))(((((.((.(......).)).)))))..)))).))))..)).)
Thermodynamic Ensemble Prediction
(((((({(((..(((((.....)))))..}}}..{{,((({(..{{{..,,))),....))}}}.))))))),)(.((..((((((((.....((((((......................................................,{{{..,.....)}.||{((,({{..||||}..||,||.},.)),)).))))))(((((.(({,...,,,}.}}.)))))..))))}})))..)).)
Forensic Context
No forensic context available.