Basic Information
Symbol
hsa_chr12_0100800
RNA Class
transcript (circRNA)
Alias
hsa-TPCN1_0028
Host gene
TPCN1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
12:113729425-113729903
UCSC (hg19)
Location (GRCh38)
12:113291620-113292098
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-85.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-90.35 kcal/mol
Frequency:
0.0006
Diversity:
56.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
....(((..........((((..(((((((.((.(((............))).)).)))))))..)))).((((((.(...........))))))).))).((((..((...(((((...))))).))..)))).(((((((((((....((((......((.((.((.((((((((.....))).(((((..........(((((......)))))...((((...))))...........)))))))))).)).)).))...)))))))))))))))....
Thermodynamic Ensemble Prediction
....(((..........((((..(((((((.((.(((............))).)).)))))))..)))).((((((.{...........,)))))).))).((((..{{...(((((...))))).}}..)))).(((((((((((,,,{((,({{({{{,({((.,,.(((,{{{{....,)}}.||||,}}}}}}}...(((((......})))).,.{{{,.,,||}},....,,.....})))))),,.},.}),})}}}),,,}))))))))))....
Forensic Context
No forensic context available.